PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022740379.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | ZF-HD | ||||||||
Protein Properties | Length: 236aa MW: 26532.5 Da PI: 7.6286 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 104.3 | 7.8e-33 | 50 | 105 | 3 | 59 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 k rY+eClkNhA+ +Gg+avDGCgEfmp+ g+egt +alkCaAC+CHRnFHR+e+e+ XP_022740379.1 50 KPRYRECLKNHAVGIGGQAVDGCGEFMPA-GTEGTLDALKCAACNCHRNFHRKETEQ 105 779*************************9.999*********************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 236 aa Download sequence |
MEFEDQEEQE EEMGLAPSYD SLANSSGVKM SGVEPGSITP TGQQQQQQRK PRYRECLKNH 60 AVGIGGQAVD GCGEFMPAGT EGTLDALKCA ACNCHRNFHR KETEQGSPNS IPTTDLYFHH 120 HQPPQFTPYF RAPAGYLHLA GQQRPLALPS TSGGGGGHSR EDQEDVSNQG SSRKRFRTKF 180 TQEQKEKMLE LAERLGWRIQ KHDETVVQQF CYENGVKRHV LKVWMHNNKH TLGKKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G24660.1 | 1e-74 | ZF-HD family protein |