PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022740156.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 611aa    MW: 67160.4 Da    PI: 4.8429
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022740156.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS371.41.2e-1132446112374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      ++Ll+cA+ +s+++ e+a + L rl+e +s+ gdp++R+a+yfteAL +r++    +  k l++ et+   s++ + ++k++++++P+ kf+hl
  XP_022740156.1 244 LKALLDCAR-LSESEPERAIKSLVRLRESVSECGDPTERVAFYFTEALYNRVSL---QAEKRLTMLETT---SEDFTISYKALNDACPYSKFAHL 331
                     689******.666789999999*******************************9...777778888887...89999****************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     taNqaIlea+++++++Hi+Df+i qG+QW+aLlqaLa+R++g+p ++Ri g+ +p  g   + +l +tg+rL++fA+ l+++fef++ v + +++
  XP_022740156.1 332 TANQAILEATDRASKIHIVDFGIVQGVQWAALLQALATRTAGKPtRIRISGIPAPVLGssPAPSLYATGNRLRDFAKLLDLNFEFEP-VLTPIKE 425
                     ****************************************77666*********998888999************************.799**** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     l+ +++rv+++E+laVn++lql++lld s  + +   + L+l k l+Pk+v++ e ea++n+  F++rf +al yysa+f+sle +lpr+s+eri
  XP_022740156.1 426 LNGSSFRVDEDEVLAVNFMLQLYNLLDASPVTVE---TALRLAKALNPKIVTLGEFEASLNRVGFVNRFKNALTYYSAVFESLEPNLPRDSQERI 517
                     **************************88877777...9********************************************************* PP

            GRAS 284 kvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaWr 374
                      vEr llgr+i  v+ + +ae  rer+e +e+W+  +e+aGF++v+ls++a +qak ll +++ s  y++ e+s  ++ l W++ pL++vS+Wr
  XP_022740156.1 518 LVERLLLGRKIAGVIGADEAEnPRERMEDKEQWKVLMESAGFETVTLSHYAISQAKVLLWNYNySSSYSLIESSPGFLsLAWNEVPLLTVSSWR 611
                     ***************887777589***************************************9999**9999888888**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 611 aa     Download sequence    
MAYMCADSGN LMAIAQQVIK QKQQQEQQQQ QHHQQQQQLL GLSPFTLNAW PNNTHHGVSN  60
SPNLGYGLSG SGFTDPFQGD TGEGFQFPNM EHHPSSGFRF PDFGGGAGGE FDSDEWMDSL  120
MNSGDSTDSS NLPSGCDAWQ NNADFGLYGG DPFSACPNRL SVACSTPSDL NRVIFSAEAQ  180
KNPSTTVQAQ PQLPTWALSP PPPPPQVTVK ETKTSRPPSQ TPLKNDAGRV SSGSPETESA  240
SLLLKALLDC ARLSESEPER AIKSLVRLRE SVSECGDPTE RVAFYFTEAL YNRVSLQAEK  300
RLTMLETTSE DFTISYKALN DACPYSKFAH LTANQAILEA TDRASKIHIV DFGIVQGVQW  360
AALLQALATR TAGKPTRIRI SGIPAPVLGS SPAPSLYATG NRLRDFAKLL DLNFEFEPVL  420
TPIKELNGSS FRVDEDEVLA VNFMLQLYNL LDASPVTVET ALRLAKALNP KIVTLGEFEA  480
SLNRVGFVNR FKNALTYYSA VFESLEPNLP RDSQERILVE RLLLGRKIAG VIGADEAENP  540
RERMEDKEQW KVLMESAGFE TVTLSHYAIS QAKVLLWNYN YSSSYSLIES SPGFLSLAWN  600
EVPLLTVSSW R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.10.0GRAS family protein