PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022739121.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 195aa    MW: 22585.5 Da    PI: 7.2588
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022739121.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF62.93.4e-202975248
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48
                    + e++s+rqvtfskRr g++ KA+ELS+LC+aev ++ +s++ ++y+
  XP_022739121.1 29 KLEDESKRQVTFSKRRRGLFNKAKELSTLCGAEVGILTLSKSRRVYT 75
                    6799****************************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MEDNVLMSNA TEAKKTRSSR GRQRIEIKKL EDESKRQVTF SKRRRGLFNK AKELSTLCGA  60
EVGILTLSKS RRVYTNDNVE AVLDRYLAES SGQGNYSWIK QKEVKEDISG GFWLDQPIEN  120
MGLVELLEYA MALNDLRKNA EARVEELSIQ KSTCLWQYVA DQELNKAQFL QQLMVGGNYD  180
WFRDSDNFTP VEHRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72350.13e-28M-type_MADS family protein