PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022738701.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 678aa MW: 75674.6 Da PI: 5.3709

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022738701.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	46.1	9e-15	479	525	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h ErrRR++iN++f L++l+P++ K++K++iL ++eY+++L+ XP_022738701.1 479 NHVLSERRRREKINERFMILKSLVPSN-----SKVDKVSILDVTIEYLQDLE 525 79999*******************8.....7**************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 678 aa Download sequence
MATGVQNQES VPKNLKKQLA LAVRDIQWGY AIFWSISARR PGVLEWADGY YNGDIKTRKT 60 VQAVELNADQ LGLQRSEQLR ELYESLSAGD SSPQARRPSA ALSPEDLTDT EWYYLVCMSF 120 VFNIGQGLPG RTLSSGQSIW LFNAHHAESK VFSRSLLAKV GACALILAKP ILVNTLRNDS 180 LVYVFMAGNF GNRLSQSASI QTVVCFPFSG GVIELGVTDL VLEDLCLIQR IKTSFLDAPQ 240 TIGSNKSILV AARTGNDKDL ACPALDPQIL DTKLSPLLDC EQLEMASPND SSDGFEPNHP 300 AEDSFMIEGI NGGASQVQSW QFMDEEFSNC VHHSLNSSDC ISQTFVDHGN VVPLCQGEKD 360 NDNGLQDVEE CNKTKLTSLD LRSDDLHYQT VLSALLKSSH QLILGPHFRN SNQESSFVSW 420 KKNVLVKSQK ARDETPQKLL KKILFEVPQM HDKGLLESPE DNGVRDAAWR PEADEICGNH 480 VLSERRRREK INERFMILKS LVPSNSKVDK VSILDVTIEY LQDLERRVEE LESCRELIEL 540 EARMKRKSQD HVERTSDNYG NNKITNGKKS SLSKRKACDI DEAEQEIDYV ISKDGSTDNV 600 TVSTNNKDFL IEFRCPFREG ILLEIMDALS ILNLDCHSVQ SSTTEGILSL TIKSKYKGST 660 VAKVGTIKQA LQRVAWKC

Sequence ? help Back to Top

Protein Sequence Length: 678 aa Download sequence

MATGVQNQES VPKNLKKQLA LAVRDIQWGY AIFWSISARR PGVLEWADGY YNGDIKTRKT  60
VQAVELNADQ LGLQRSEQLR ELYESLSAGD SSPQARRPSA ALSPEDLTDT EWYYLVCMSF  120
VFNIGQGLPG RTLSSGQSIW LFNAHHAESK VFSRSLLAKV GACALILAKP ILVNTLRNDS  180
LVYVFMAGNF GNRLSQSASI QTVVCFPFSG GVIELGVTDL VLEDLCLIQR IKTSFLDAPQ  240
TIGSNKSILV AARTGNDKDL ACPALDPQIL DTKLSPLLDC EQLEMASPND SSDGFEPNHP  300
AEDSFMIEGI NGGASQVQSW QFMDEEFSNC VHHSLNSSDC ISQTFVDHGN VVPLCQGEKD  360
NDNGLQDVEE CNKTKLTSLD LRSDDLHYQT VLSALLKSSH QLILGPHFRN SNQESSFVSW  420
KKNVLVKSQK ARDETPQKLL KKILFEVPQM HDKGLLESPE DNGVRDAAWR PEADEICGNH  480
VLSERRRREK INERFMILKS LVPSNSKVDK VSILDVTIEY LQDLERRVEE LESCRELIEL  540
EARMKRKSQD HVERTSDNYG NNKITNGKKS SLSKRKACDI DEAEQEIDYV ISKDGSTDNV  600
TVSTNNKDFL IEFRCPFREG ILLEIMDALS ILNLDCHSVQ SSTTEGILSL TIKSKYKGST  660
VAKVGTIKQA LQRVAWKC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	484	489	ERRRRE
2	485	490	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	0.0	bHLH family protein