PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022738236.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | NAC | ||||||||
Protein Properties | Length: 259aa MW: 29761 Da PI: 8.8365 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 155.4 | 2.6e-48 | 15 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF+Ptdeelv +yLk kv + +l++ ++i+e++ ++++PwdLp + e+e yfFs+++ ky+tg+r nrat+sgyWkatg dk+++s+ XP_022738236.1 15 LPPGFRFQPTDEELVFQYLKCKVFSLPLPA-SIIPELNFCNYDPWDLPGE---LEQERYFFSSKEAKYKTGNRINRATASGYWKATGLDKQIISR 105 79****************************.89***************55...46799************************************* PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ g++ktLvf+ g+ p+g++tdW+mheyrl XP_022738236.1 106 RNQIAGMRKTLVFHMGKPPHGSRTDWIMHEYRL 138 *******************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MNKQLNFVRD GVTKLPPGFR FQPTDEELVF QYLKCKVFSL PLPASIIPEL NFCNYDPWDL 60 PGELEQERYF FSSKEAKYKT GNRINRATAS GYWKATGLDK QIISRRNQIA GMRKTLVFHM 120 GKPPHGSRTD WIMHEYRLVT VTNKDCNSPL AKNPIIQNYL NHHMDKWVLC HIFLKKRTKK 180 STEEEVIQSC CNDNKEVKKT MAVAVHHEPK IFDFMREKAR ITDVLSSSSS SSSISSSITE 240 VSSIGEENVE ESSSCNIVF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 8e-79 | NAC family protein |