PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022737151.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 347aa MW: 38956.8 Da PI: 7.8213

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022737151.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.7	2.4e-09	180	227	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ +L++l+P + +k Ka +L + ++Y++ Lq XP_022737151.1 180 SHSLAERVRREKISERMKTLQRLVPGC----DKVTGKALMLDEIINYVQTLQ 227 8***********************9....555**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MAAFSYQPQP LLLDSIFLPN MNPTKVSGFM EEGNMNSNCF SQFYPPEPVQ ESTLHHKFHE 60 SNCLDHSSKV GFSDNEPSAT KKQSTDESTA VDKLESGEQV TQNVTLADRK RKTRNGTTLN 120 SAQSKDAKEG KSKKQKKCND ALKNEMKESK ADKKDQKKSP EEPSTGYIHV RARRGQATDS 180 HSLAERVRRE KISERMKTLQ RLVPGCDKVT GKALMLDEII NYVQTLQNRV EFLSMKLAFV 240 NPMFYDFGVD LEELMVRPER VNSIASSVPC LQQCNPTQPT AFVDTTTTTF TPAHNYPLMD 300 ASAALFLHQG QRPFSQPQGN GGLLWDVEDQ SQKFLSSSGL NNFCSFH

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MAAFSYQPQP LLLDSIFLPN MNPTKVSGFM EEGNMNSNCF SQFYPPEPVQ ESTLHHKFHE  60
SNCLDHSSKV GFSDNEPSAT KKQSTDESTA VDKLESGEQV TQNVTLADRK RKTRNGTTLN  120
SAQSKDAKEG KSKKQKKCND ALKNEMKESK ADKKDQKKSP EEPSTGYIHV RARRGQATDS  180
HSLAERVRRE KISERMKTLQ RLVPGCDKVT GKALMLDEII NYVQTLQNRV EFLSMKLAFV  240
NPMFYDFGVD LEELMVRPER VNSIASSVPC LQQCNPTQPT AFVDTTTTTF TPAHNYPLMD  300
ASAALFLHQG QRPFSQPQGN GGLLWDVEDQ SQKFLSSSGL NNFCSFH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	109	136	RKRKTRNGTTLNSAQSKDAKEGKSKKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	7e-58	bHLH family protein