PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022735891.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

LBD

Protein Properties

Length: 298aa MW: 33506.4 Da PI: 5.8936

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022735891.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	121.1	6e-38	10	106	1	97
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCaaCk++rrkC ++C lapyfp++q+k f+n+hklFG+sn++k+l++l++ ++ +am+s+ y+A++r r Pv+G++gvi++l q++ l++e XP_022735891.1 10 ACAACKYQRRKCIPECLLAPYFPSDQTKVFQNAHKLFGVSNIVKILRSLDPAQHAEAMRSIKYQANVRDRFPVHGCLGVIRQLYYQIQLLEEEFY 104 7*****************************************************************************************99976 PP DUF260 96 ll 97 ++ XP_022735891.1 105 AV 106 65 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MTLKGGTTSA CAACKYQRRK CIPECLLAPY FPSDQTKVFQ NAHKLFGVSN IVKILRSLDP 60 AQHAEAMRSI KYQANVRDRF PVHGCLGVIR QLYYQIQLLE EEFYAVLAQL EMYRQHHHQQ 120 HQISSMPDDV PSQLELGMAP PTNALPLFNQ VPHQPYTTVS NVQVSMQHSY STSNNIGYSS 180 SYVDSKENVG NNSLWIQHPF LATNNNSSNS NGSPMAIQSQ LLVPNSQPLA VQQEVVQDYD 240 EIHPFFDTID DRQSYIDSKE AYDSSSEESP KDTTQLMEHV AENELKSAAA CFSLTSVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47870.1	5e-65	LBD family protein