PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022735740.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | M-type_MADS | ||||||||
Protein Properties | Length: 151aa MW: 17639.9 Da PI: 5.4435 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 53.2 | 3.8e-17 | 29 | 64 | 2 | 37 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevav 37 + e++s+rqvtf kRr g++ KA+ELS+LC++ev + XP_022735740.1 29 KLEDESKRQVTFFKRRRGLFNKAKELSTLCGVEVVL 64 6799******************************87 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 151 aa Download sequence |
MEDNVLMSNA TEAKKTRSSR GRQRNEIKKL EDESKRQVTF FKRRRGLFNK AKELSTLCGV 60 EVVLDRYLAE SSSQGNYSWI KQKEVKEDIS GGFWLDQSIE NMGLVELLEY AMTLNDLRKN 120 AEARVEELSI QKSTYLWQYV ADQELNKDLD F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G72350.1 | 7e-15 | M-type_MADS family protein |