PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022734944.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 237aa MW: 27572.5 Da PI: 7.8869 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.1 | 5.6e-29 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 +rienk+nrqvtfskRrng+ KKA+ELSvLCdaeva+iifss+gkl e+ XP_022734944.1 9 ERIENKINRQVTFSKRRNGLQKKAFELSVLCDAEVALIIFSSRGKLSEFG 58 69**********************************************95 PP | |||||||
2 | K-box | 84.6 | 2.1e-28 | 76 | 170 | 5 | 99 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 s+++ +e+++++l+qe+ +Lk+++e+Lqr qRhllGe+Le+Ls+keL ++e+qL++ l+ R+kK +llle +eel+kke+el++enk+L+ +le XP_022734944.1 76 SQVNIAENETQTLHQEVLRLKAKYESLQRCQRHLLGEELETLSVKELYKIEKQLDRTLSLARQKKVQLLLERMEELRKKERELEDENKQLKCQLE 170 55668999**********************************************************************************98875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MGRGKVMLER IENKINRQVT FSKRRNGLQK KAFELSVLCD AEVALIIFSS RGKLSEFGSN 60 TVPQTLEKYW QHRYASQVNI AENETQTLHQ EVLRLKAKYE SLQRCQRHLL GEELETLSVK 120 ELYKIEKQLD RTLSLARQKK VQLLLERMEE LRKKERELED ENKQLKCQLE LEQCFQAAQG 180 LGDPNIEVGN EYNMPPLQAN HAQQEPSMPM GYHQFIPQRV TEDWADGGAN KCTAVWL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45650.1 | 1e-55 | MIKC_MADS family protein |