PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022734454.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 590aa MW: 64283.1 Da PI: 9.7376

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022734454.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.3	5.8e-05	67	89	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_022734454.1 67 FICEVCKKGFQREQNLQLHRRGH 89 89*******************88 PP
2	zf-C2H2	13.1	0.00028	143	165	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_022734454.1 143 WKCEKCSKRYAVQSDWKAHSKTC 165 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 590 aa Download sequence
MSIGPFFGIR EEDQNQMKQQ HSSTPTSSTG PAPPPPQKKK RNQPGTPNPD AEVIALSPKT 60 LMATNRFICE VCKKGFQREQ NLQLHRRGHN LPWKLRQKTT KEVKRKVYLC PEPTCVHHDP 120 SRALGDLTGI KKHYSRKHGE KRWKCEKCSK RYAVQSDWKA HSKTCGTREY RCDCGTLFSR 180 RDSFITHRAF CDALAQESAR HPPSLNPIGY HFYGSSNTSL GLSQVGTQIS SIQGQNNQTG 240 DILRHGDGGR STQFDHLLSP SMGSSSSFRP QQPMVSSAAF LMQESNQNFN QEHQPQQGLL 300 GNSKSFQGLM QFPDMQNNTS NPPSAANLFN LSFLSNSSNT SIINNSNNAN ADNNLTSSGL 360 LISDHFNNEN VGGRGTSEAS NLFSNNIMGD QITSNIPSFF TSSVQNNNMV PQMSATALLQ 420 KAVQIGSTSS NNNSATLLRS FSTSSTGTKS SDFGGILGDS TVKNLHELMN SLASGNSSIF 480 GGGFGGVNTY STAQGLESPY LNRNSMEQEK QQQQKQNLNV SVGGSDRLTR DFLGVGQMVR 540 SMSGGGVAQR VQQSQQQQEG MGLSALGSER NTNTTAQAGH QSFGGGESFQ

Sequence ? help Back to Top

Protein Sequence Length: 590 aa Download sequence

MSIGPFFGIR EEDQNQMKQQ HSSTPTSSTG PAPPPPQKKK RNQPGTPNPD AEVIALSPKT  60
LMATNRFICE VCKKGFQREQ NLQLHRRGHN LPWKLRQKTT KEVKRKVYLC PEPTCVHHDP  120
SRALGDLTGI KKHYSRKHGE KRWKCEKCSK RYAVQSDWKA HSKTCGTREY RCDCGTLFSR  180
RDSFITHRAF CDALAQESAR HPPSLNPIGY HFYGSSNTSL GLSQVGTQIS SIQGQNNQTG  240
DILRHGDGGR STQFDHLLSP SMGSSSSFRP QQPMVSSAAF LMQESNQNFN QEHQPQQGLL  300
GNSKSFQGLM QFPDMQNNTS NPPSAANLFN LSFLSNSSNT SIINNSNNAN ADNNLTSSGL  360
LISDHFNNEN VGGRGTSEAS NLFSNNIMGD QITSNIPSFF TSSVQNNNMV PQMSATALLQ  420
KAVQIGSTSS NNNSATLLRS FSTSSTGTKS SDFGGILGDS TVKNLHELMN SLASGNSSIF  480
GGGFGGVNTY STAQGLESPY LNRNSMEQEK QQQQKQNLNV SVGGSDRLTR DFLGVGQMVR  540
SMSGGGVAQR VQQSQQQQEG MGLSALGSER NTNTTAQAGH QSFGGGESFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-113	C2H2 family protein