PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022733563.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 226aa MW: 25975.9 Da PI: 9.6305 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.4 | 1.9e-28 | 15 | 64 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRr g+lKKA+ELSvLCdaeva+iifs++gkl e++s XP_022733563.1 15 RIENATSRQVTFSKRRSGLLKKAFELSVLCDAEVALIIFSPRGKLCEFAS 64 8***********************************************86 PP | |||||||
2 | K-box | 88.6 | 1.2e-29 | 74 | 170 | 1 | 97 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 y+++++++ +e+++++l++e+a++ k+ie Lq R+llGe+L+s++l+eLqq+eqqLe+s++++R++K+++++eqi++lq+kek l en +L XP_022733563.1 74 YKRHTKTKPTEQNMQHLKTEAANMVKKIEILQDLRRKLLGEGLGSCTLEELQQIEQQLERSVSNVRARKTQVFKEQIDRLQEKEKILAAENAKLY 168 5667777899************************************************************************************9 PP K-box 96 kk 97 +k XP_022733563.1 169 EK 170 88 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MPGAEMVRGK TQMRRIENAT SRQVTFSKRR SGLLKKAFEL SVLCDAEVAL IIFSPRGKLC 60 EFASSSMQET IERYKRHTKT KPTEQNMQHL KTEAANMVKK IEILQDLRRK LLGEGLGSCT 120 LEELQQIEQQ LERSVSNVRA RKTQVFKEQI DRLQEKEKIL AAENAKLYEK CVMQPWKGSK 180 EQKENIPYNE SSPNSDVETD LFIGPPEGRT KSNLQRANPM PCIYEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 1e-80 | MIKC_MADS family protein |