PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022733082.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 484aa MW: 53075.3 Da PI: 7.9358

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022733082.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.7	1.2e-41	191	268	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC+ dls+akeyh++h+vCe hsk+p+v+v gle+rfCqqCsrfh lsefDe+krsCrrrL++hn+rrrk+q+ XP_022733082.1 191 RCQVEGCNLDLSSAKEYHQKHRVCESHSKSPKVIVGGLERRFCQQCSRFHGLSEFDEKKRSCRRRLSDHNARRRKPQT 268 6**************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MKHSMSSISL MEWNAKTPLQ WDWENLMMLN ATPTEIPRKL TPIEWDIDGE GGMDYGSLYS 60 SSAAGGSGGS GSDLGLASLS KSSKSASINS SSMGEVKATK FTLETFEAVP DDISNKKEVS 120 KVELTGTSPT LEATVGSGEP LLSLKLGKRS YFEDVCAGSN AKNSSYSVNP GPSPIPAKRS 180 KPICQSTHVL RCQVEGCNLD LSSAKEYHQK HRVCESHSKS PKVIVGGLER RFCQQCSRFH 240 GLSEFDEKKR SCRRRLSDHN ARRRKPQTEA IHFNAARLTS SSYDGKQQVG FVWNKVPFLH 300 ARPNEDFTWE GTSDFKSPQF KGYTPAKVGN VNGQLQLPGN QLLNSITMQC HDSNTCLPAK 360 GKHSTTAVLN QGVEESTVAS NMGTTQDIHR ALSLLSNDTW DSCKPKHGSL AYSMHANPAT 420 MSQPAMNAVS QGFPLALSEN WLMEQQTAES QAHKALHSDG DNHFQEFQLH KASYDSSFFS 480 NQIN

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MKHSMSSISL MEWNAKTPLQ WDWENLMMLN ATPTEIPRKL TPIEWDIDGE GGMDYGSLYS  60
SSAAGGSGGS GSDLGLASLS KSSKSASINS SSMGEVKATK FTLETFEAVP DDISNKKEVS  120
KVELTGTSPT LEATVGSGEP LLSLKLGKRS YFEDVCAGSN AKNSSYSVNP GPSPIPAKRS  180
KPICQSTHVL RCQVEGCNLD LSSAKEYHQK HRVCESHSKS PKVIVGGLER RFCQQCSRFH  240
GLSEFDEKKR SCRRRLSDHN ARRRKPQTEA IHFNAARLTS SSYDGKQQVG FVWNKVPFLH  300
ARPNEDFTWE GTSDFKSPQF KGYTPAKVGN VNGQLQLPGN QLLNSITMQC HDSNTCLPAK  360
GKHSTTAVLN QGVEESTVAS NMGTTQDIHR ALSLLSNDTW DSCKPKHGSL AYSMHANPAT  420
MSQPAMNAVS QGFPLALSEN WLMEQQTAES QAHKALHSDG DNHFQEFQLH KASYDSSFFS  480
NQIN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	248	265	KKRSCRRRLSDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	2e-87	SBP family protein