PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022732786.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 211aa MW: 24264.9 Da PI: 9.8887 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 96.9 | 8.3e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien s rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye+ss XP_022732786.1 9 KRIENASSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 78.4 | 1.8e-26 | 83 | 170 | 10 | 97 |
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 e+++++ ++++ + k+ie L+ ++R+llG++Le++sl++Lq Le+qLe+sl+kiR++Kn+l+ eqie+l+ e++l+een +Lr + XP_022732786.1 83 VEQNMQNVKEDAHSMAKKIEFLEDSKRKLLGNGLEPCSLNDLQVLENQLERSLSKIRARKNQLFWEQIEKLKGEERRLEEENAKLRGQ 170 5789*********************************************************************************966 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MVRGKTQMKR IENASSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFSSA 60 CMNKIIDRYQ KKEKDLGIGS KGVEQNMQNV KEDAHSMAKK IEFLEDSKRK LLGNGLEPCS 120 LNDLQVLENQ LERSLSKIRA RKNQLFWEQI EKLKGEERRL EEENAKLRGQ CGVRPRQSST 180 SLSDHELQTQ SIEVETELFI GPPETRIIQK P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22950.1 | 2e-67 | MIKC_MADS family protein |