PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022732749.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 164aa    MW: 18937.4 Da    PI: 8.933
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022732749.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF66.82.2e-212369248
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48
                    + e++s+rqvtfskRr g++ KA+ELS+LC++ev ++ +s++g++y+
  XP_022732749.1 23 KLEDESKRQVTFSKRRRGLFNKAKELSTLCGVEVGILTLSKSGRVYT 69
                    6799******************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MSNATEAKKT RSSRGRQRIE IKKLEDESKR QVTFSKRRRG LFNKAKELST LCGVEVGILT  60
LSKSGRVYTN DNVDAVLDRY LAESSSQGNY SWIKQKEVKE DISGGFWLDQ SIENMGLVEQ  120
LEYVMALIDL RKNAEARVEE LSIQKSTYLW QYVADQELNK DRDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72350.14e-28M-type_MADS family protein