PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022732684.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HB-other

Protein Properties

Length: 518aa MW: 57838.2 Da PI: 7.1791

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022732684.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	53.3	4.6e-17	20	75	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR t+ q+ +Le+++++nr p e++++LA ++gLte+q++ WF+ rR k+k+ XP_022732684.1 20 KKRMLKTPAQIMALENFYKENRFPLDEMKAQLAVQIGLTEKQISSWFCHRRLKDKR 75 899***************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MEDSGEMQTE ENKVSLDVNK KRMLKTPAQI MALENFYKEN RFPLDEMKAQ LAVQIGLTEK 60 QISSWFCHRR LKDKRRDESY ANGRQDHSSG VIQDHGSGLR QDSCGSIKQG DYRHIDLREV 120 ESRRIYGQEP LAADLTYEHR SHQNPYDAHM EDTSSESSSS LHDQLFSESR DPYDMQVSDK 180 LTENGALMQI NPGSSKSVGY KPSGYLKVKG QIENPAITAV KKQLGRHYQE DGPVLGIEFD 240 ALPPGAFEFL RSNPVNAASI YVGDPQQPHS PDIYGVIKQP NLNIINEVHN SKMSSQDSCM 300 EGTKFNTVHG SERQERKSHH QLKYKSSVLC SNPFPGQNSL FDSNKGSSEK TAVSDCKRSG 360 MSSKLSVERM GSDSLSNHPG SYGGKIANEQ EKSWLHDNDN HTYKAPKNEN LSRTSNLIHR 420 CSEFIGPERG PSARMAKVEK PGGEWKLKKG FPVRVKTDPT NELRVAKRVN VEFPLQDFVA 480 NASHARLPLL TNPTKGSSMD VPSSFSEDET AETSSSSG

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MEDSGEMQTE ENKVSLDVNK KRMLKTPAQI MALENFYKEN RFPLDEMKAQ LAVQIGLTEK  60
QISSWFCHRR LKDKRRDESY ANGRQDHSSG VIQDHGSGLR QDSCGSIKQG DYRHIDLREV  120
ESRRIYGQEP LAADLTYEHR SHQNPYDAHM EDTSSESSSS LHDQLFSESR DPYDMQVSDK  180
LTENGALMQI NPGSSKSVGY KPSGYLKVKG QIENPAITAV KKQLGRHYQE DGPVLGIEFD  240
ALPPGAFEFL RSNPVNAASI YVGDPQQPHS PDIYGVIKQP NLNIINEVHN SKMSSQDSCM  300
EGTKFNTVHG SERQERKSHH QLKYKSSVLC SNPFPGQNSL FDSNKGSSEK TAVSDCKRSG  360
MSSKLSVERM GSDSLSNHPG SYGGKIANEQ EKSWLHDNDN HTYKAPKNEN LSRTSNLIHR  420
CSEFIGPERG PSARMAKVEK PGGEWKLKKG FPVRVKTDPT NELRVAKRVN VEFPLQDFVA  480
NASHARLPLL TNPTKGSSMD VPSSFSEDET AETSSSSG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	69	77	RRLKDKRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	1e-80	HB-other family protein