PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022732683.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HB-other

Protein Properties

Length: 530aa MW: 59300.9 Da PI: 7.9012

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022732683.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	53.3	4.8e-17	33	88	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR t+ q+ +Le+++++nr p e++++LA ++gLte+q++ WF+ rR k+k+ XP_022732683.1 33 KKRMLKTPAQIMALENFYKENRFPLDEMKAQLAVQIGLTEKQISSWFCHRRLKDKR 88 899***************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MSSVKSCKYF QQTYLNSGEM QTEENKVSLD VNKKRMLKTP AQIMALENFY KENRFPLDEM 60 KAQLAVQIGL TEKQISSWFC HRRLKDKRRD ESYANGRQDH SSGVIQDHGS GLRQDSCGSI 120 KQGDYRHIDL REVESRRIYG QEPLAADLTY EHRSHQNPYD AHMEDTSSES SSSLHDQLFS 180 ESRDPYDMQV SDKLTENGAL MQINPGSSKS VGYKPSGYLK VKGQIENPAI TAVKKQLGRH 240 YQEDGPVLGI EFDALPPGAF EFLRSNPVNA SIYVGDPQQP HSPDIYGVIK QPNLNIINEV 300 HNSKMSSQDS CMEGTKFNTV HGSERQERKS HHQLKYKSSV LCSNPFPGQN SLFDSNKGSS 360 EKTAVSDCKR SGMSSKLSVE RMGSDSLSNH PGSYGGKIAN EQEKSWLHDN DNHTYKAPKN 420 ENLSRTSNLI HRCSEFIGPE RGPSARMAKV EKPGGEWKLK KGFPVRVKTD PTNELRVAKR 480 VNVEFPLQDF VANASHARLP LLTNPTKGSS MDVPSSFSED ETAETSSSSG

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MSSVKSCKYF QQTYLNSGEM QTEENKVSLD VNKKRMLKTP AQIMALENFY KENRFPLDEM  60
KAQLAVQIGL TEKQISSWFC HRRLKDKRRD ESYANGRQDH SSGVIQDHGS GLRQDSCGSI  120
KQGDYRHIDL REVESRRIYG QEPLAADLTY EHRSHQNPYD AHMEDTSSES SSSLHDQLFS  180
ESRDPYDMQV SDKLTENGAL MQINPGSSKS VGYKPSGYLK VKGQIENPAI TAVKKQLGRH  240
YQEDGPVLGI EFDALPPGAF EFLRSNPVNA SIYVGDPQQP HSPDIYGVIK QPNLNIINEV  300
HNSKMSSQDS CMEGTKFNTV HGSERQERKS HHQLKYKSSV LCSNPFPGQN SLFDSNKGSS  360
EKTAVSDCKR SGMSSKLSVE RMGSDSLSNH PGSYGGKIAN EQEKSWLHDN DNHTYKAPKN  420
ENLSRTSNLI HRCSEFIGPE RGPSARMAKV EKPGGEWKLK KGFPVRVKTD PTNELRVAKR  480
VNVEFPLQDF VANASHARLP LLTNPTKGSS MDVPSSFSED ETAETSSSSG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	82	90	RRLKDKRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	5e-79	HB-other family protein