PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022732346.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | ERF | ||||||||
Protein Properties | Length: 279aa MW: 31453 Da PI: 5.4346 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 67.1 | 3.4e-21 | 125 | 175 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr++ +grW+AeIrdp+ +rkr++lg+f+t+eeAa a+++a++ l+g XP_022732346.1 125 KKFRGVRQRV-WGRWAAEIRDPN---QRKRVWLGTFDTPEEAATAYDKAALLLRG 175 59******99.**********93...36***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence |
MISTQSESHH SYAGMFKFTE HVITSIKPPP QPARNIPQKV LRIILTDADA TDSSSDEEHD 60 EQPTPTRSRI RRINTVRRVK RHVKEINFQP LFPSSSASTT KLPVKQQPST KRERPSPQSD 120 VTRCKKFRGV RQRVWGRWAA EIRDPNQRKR VWLGTFDTPE EAATAYDKAA LLLRGPNAVT 180 NFSIPVLEEK EAPVDQSQGD AFDSSTPCCS PSSSSSVLRY EEWTPSDGLG HMEVDVGTSG 240 FQIDVPSYST DLFLSDELFA QQQEDEISDF NVDDFLVLD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53290.1 | 2e-31 | ERF family protein |