PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022732091.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 222aa MW: 24925.7 Da PI: 8.6358 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.4 | 4e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKAeELS+LCdaeva+iifs tgkl+e++s XP_022732091.1 9 KKIDNVTSRQVTFSKRRRGLFKKAEELSILCDAEVALIIFSATGKLFEFAS 59 68***********************************************86 PP | |||||||
2 | K-box | 50.1 | 1.2e-17 | 95 | 170 | 23 | 98 |
K-box 23 kLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +L kei +++R++ GedL+ L++ eLqqLe+ Le++l+++ ++K e ++++i+ l kk lqeenk+L++k+ XP_022732091.1 95 RLSKEIAAKSHQLRQMRGEDLQGLNIDELQQLEKMLESGLTRVLETKGERMMNEISSLEKKGALLQEENKQLKQKM 170 788888888899**************************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MAREKIKIKK IDNVTSRQVT FSKRRRGLFK KAEELSILCD AEVALIIFSA TGKLFEFASS 60 SMKDILGKYN LHSSNLHKLD RPSLELQLEN SNRIRLSKEI AAKSHQLRQM RGEDLQGLNI 120 DELQQLEKML ESGLTRVLET KGERMMNEIS SLEKKGALLQ EENKQLKQKM LTLCKGKRPV 180 LADSDVVVQE EGMSSESVTN VCSCSNGPPL DDDSSDTSLK LG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-90 | MIKC_MADS family protein |