PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022731885.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 433aa MW: 47992.2 Da PI: 7.9288

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022731885.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.6	9.1e-13	367	412	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR +i +++ +L++l+P+ +k s a++L +Av+YIk+Lq XP_022731885.1 367 SIAERVRRTKISERMRKLQDLVPNM----DKQTSTADMLDLAVDYIKELQ 412 689*******************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MESDLQHHHH HLLDYHQPQN HQKQMNSGLM RYQSAPSSYF SNILDRDFCQ EFLNRPTSPE 60 TERIIARFLS GSGDAGGGGG GNTENISNQN LCPVTHNSPV RETAAKIEQR TQIMTPMINQ 120 TGVMQQQQQQ QRGNYSSASQ NFYQSQPQRH LSNQQSGSTM DYRIPNSTGM ARPTQMKMSS 180 GNNTNLIRHS SSPAGLFSNI NIENSYGVMR GMGDYGSVNI SSNKEAAFPS ASRPPPSGLM 240 SPIAELGNEN VGPKNSSENV GFGENRHKNY SSRFPVTSWD NSTMISDNMS GVKGLSEDDG 300 SLSGLEFDGV ETQNIDAGNH PPPLLAHHLS LPKSSPDMSA IDKFLQYQDS IPCKIRAKRG 360 CATHPRSIAE RVRRTKISER MRKLQDLVPN MDKQTSTADM LDLAVDYIKE LQKEVKTLSE 420 NRANCSCANK QQQ

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MESDLQHHHH HLLDYHQPQN HQKQMNSGLM RYQSAPSSYF SNILDRDFCQ EFLNRPTSPE  60
TERIIARFLS GSGDAGGGGG GNTENISNQN LCPVTHNSPV RETAAKIEQR TQIMTPMINQ  120
TGVMQQQQQQ QRGNYSSASQ NFYQSQPQRH LSNQQSGSTM DYRIPNSTGM ARPTQMKMSS  180
GNNTNLIRHS SSPAGLFSNI NIENSYGVMR GMGDYGSVNI SSNKEAAFPS ASRPPPSGLM  240
SPIAELGNEN VGPKNSSENV GFGENRHKNY SSRFPVTSWD NSTMISDNMS GVKGLSEDDG  300
SLSGLEFDGV ETQNIDAGNH PPPLLAHHLS LPKSSPDMSA IDKFLQYQDS IPCKIRAKRG  360
CATHPRSIAE RVRRTKISER MRKLQDLVPN MDKQTSTADM LDLAVDYIKE LQKEVKTLSE  420
NRANCSCANK QQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51140.1	4e-67	bHLH family protein