PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022731639.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 459aa MW: 48230.6 Da PI: 6.5055 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.9 | 6.4e-12 | 260 | 305 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq XP_022731639.1 260 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 305 99***********************8.....6******************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 459 aa Download sequence |
MQPCSREMQA MNSLLNPTQQ IPLQDLQSNG NSNAHQQIQN PQFDPTSPHD DFLEQMLSTL 60 PSCSWSDLKS PWDPPKSDET GPPNPDNNVG FHYDEILASK LRQHQINGGG GSSSAAAAMK 120 MMMQQQMMLE GRATAAAGAG GGGGFTMPLS LGSGAAGSHQ NDNIVDGSSF KSPNHQGGDG 180 SVQALCNSFG AGSLHGTNQS SNQFQHFHHP QGGNMQAQNF GVTAGTVMNQ SQASGSTTGG 240 TPAQPKQRVR ARRGQATDPH SIAERLRRER IAERMKALQE LVPNANKTDK ASMLDEIIDY 300 VKFLQLQVKV LSMSRLGGAA AVAPLVADMP SEGGGDCIQT SANGKQTSSP NDSLTVTEHQ 360 VAKLMEEDMG SAMQYLQGKG LCLMPISLAT AISTATCHSR NPMINNANPN NGNSNHLLLQ 420 SSGEGPSSPS MSVLTVQSAT VGNGAIDGSV KDATSVSKP |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 265 | 270 | RLRRER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G24260.1 | 2e-66 | bHLH family protein |