PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022729455.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | FAR1 | ||||||||
Protein Properties | Length: 669aa MW: 77568.4 Da PI: 7.0981 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 74.5 | 2.3e-23 | 58 | 142 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn YAke GF +r+s+s +++ +e +++++ Cs g++++++ + ++r+etrtgC a++++++ + ++w++ +++leHnH+++ XP_022729455.1 58 DFYNMYAKEQGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSEAN-----NPRPETRTGCPAMVVIRLLDCKRWRIVEVQLEHNHQVS 142 6*********************999*****************99888.....9**********************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 669 aa Download sequence |
MEEVCLNSEP VFDEIDEYEG EGDCSAVEHD ESGAKNSKKE PPPPTVGLEF DSFDEAYDFY 60 NMYAKEQGFG IRVSNSWFRS KRKERYRAKL SCSSAGFKKK SEANNPRPET RTGCPAMVVI 120 RLLDCKRWRI VEVQLEHNHQ VSPQIKRFYK SHKKMILAAR KAQPPPEPVT EIHTIKLYRT 180 AAMDAGFNGF SNISEREGIH PADHSKHLEL KEGDAYAVYN YFCRMKLTNP NFFYLMDLDD 240 NGCLKNVFWA DARSRAAYGY FCDTIAIDTT CLANKYEIPL ISFVGVNHHG QSVLLGCGFL 300 GHESVEYFVW IFRAWLKCML GHSPQVIVTD QCKSLQIAVS EVFPKARHCF CMWYIMQRVP 360 EKLGGLKGFE AIKRQLNKAV YNSLKIVEFE TSWAEMIKQH GLGDNKWVQT LYEDRKQWVP 420 VYLKDTFFAG MIPIQENESL TAFFDGYVHK HTSFKEFVDK YDLALHRKHL KEATANMQSR 480 NSCFELKTRC NFEMQLSKVY TKEIFNKFQS EVEGMYSCFN TRQVSVNGPI ITYIVKERIE 540 IEGNEKDVRS YEVLFETSQV DIRCICSLFN YKGYLCRHAL NVLNYNGVEE IPSRYILPRW 600 CKDFKGRHVD QGGSTDIDVY NTVYWHNHLH KCAVPVVEEG AQSQEHYKIA LNELQELLNR 660 FNLVEDSLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G52520.1 | 0.0 | FAR1 family protein |