PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022728866.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MYB | ||||||||
Protein Properties | Length: 260aa MW: 29482.2 Da PI: 8.5733 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46 | 1.2e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W + Ed++l+d++k G g W I+++ g++R++k+c++rw++yl XP_022728866.1 14 RGAWNAIEDQILIDYIKANGEGKWGNIPKKAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.8 | 3.8e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ +++E++l+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_022728866.1 67 RGNISEQEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNST 111 7899******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MGRKPCCSKE GLNRGAWNAI EDQILIDYIK ANGEGKWGNI PKKAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SEQEEDLIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNS TLGKKVGGEQ 120 LKQSKDQNLK KAKTQSAAET PQFTAIKTKA SKCSKFLVTH QEPYKAENVD SIPVHDAKLS 180 DGTFSTTSEE THSVNSTLDF DIADLLALDI SDSEFWKSCQ NNNSIEEAES SGVARKTWFS 240 SDQHLQFSEE LLKDWIRYDM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 5e-61 | MYB family protein |