PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022728763.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | GATA | ||||||||
Protein Properties | Length: 261aa MW: 28745.8 Da PI: 9.728 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 57.2 | 2.2e-18 | 207 | 243 | 1 | 35 |
GATA 1 Cs..nCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+ nC+t +Tp+WR+gp g+ktLCnaCG++yrk+++ XP_022728763.1 207 CTnyNCNTNDTPMWRKGPLGPKTLCNACGIKYRKEEE 243 55559*****************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MDNSQWFNQV AARMNNHNNV GDRVDLTLKL GLPNSDQNPV PYQLRPHVSP ASMAPGHLAN 60 LSFAGPNTQG MNQMGMFNQG AMVQGQQSFN GSQYAWPTDQ IVSNVHNMNY ANAFNQCCSP 120 SLGFPSYNST NSYNNFGPTH PPPPPHHHQL PAPSLVPSNI YTLIDVPPRR AANQHQLELG 180 SSSGSSSGKQ RQRRQRGGNY NDPNKRCTNY NCNTNDTPMW RKGPLGPKTL CNACGIKYRK 240 EEEKRRAKEA GSSGQQSNPN G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20750.1 | 8e-16 | GATA family protein |