PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022728695.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | WOX | ||||||||
Protein Properties | Length: 327aa MW: 37379.7 Da PI: 8.2143 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 63.4 | 3.2e-20 | 6 | 66 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++t+eql +Lee++++ r+p+a+++++++++l +++ ++V++WFqN++a++++ XP_022728695.1 6 STRWCPTPEQLMILEEMYRSgIRTPNASQIQQITSHLsfygKIEGKNVFYWFQNHKARDRQ 66 58*****************99*************************************996 PP | |||||||
2 | Wus_type_Homeobox | 120.6 | 6.5e-39 | 5 | 67 | 2 | 64 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 a+tRW+PtpeQ++iLee+y+sG+rtPn+++iq+it++L+ yGkie+kNVfyWFQN+kaR+rqk XP_022728695.1 5 ASTRWCPTPEQLMILEEMYRSGIRTPNASQIQQITSHLSFYGKIEGKNVFYWFQNHKARDRQK 67 689***********************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 327 aa Download sequence |
MSPAASTRWC PTPEQLMILE EMYRSGIRTP NASQIQQITS HLSFYGKIEG KNVFYWFQNH 60 KARDRQKLRR KLTKQLQLQQ QLYHQHQLQQ NHPNHHSLHY DSPASPAFQH LSYYNSACLF 120 PQVGAHENAA AQQVMNYTWK FDIPERVDMD KATMRMIGSD WLMMVDLGPL SSQCNNSTTR 180 PPLKTLELFP VTASNLKEEC NNSSSEPLSC TTTKSTPAKY YYFLPINLDS FLLVFLKARI 240 FISAAPVIDG HLDIPDFELG VSSVDSCMNS FSAGRFVVQR KLFLCNAFNF CTNVLGKETK 300 KEKVMNAMPL ASGFDGLELD WFWVGLN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28610.1 | 8e-39 | WOX family protein |