PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022727845.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MYB_related | ||||||||
Protein Properties | Length: 210aa MW: 23792.6 Da PI: 8.7761 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.6 | 3.3e-19 | 26 | 70 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eEdel+++++ +lG++ W++Ia +++ gRt++++k++w+++ XP_022727845.1 26 RGNFTEEEDELIIKLHSLLGNK-WSLIAGRLP-GRTDNEIKNYWNTH 70 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MYKGLLRCGK SCRLRWINYL RPDLKRGNFT EEEDELIIKL HSLLGNKWSL IAGRLPGRTD 60 NEIKNYWNTH IKRKLINGRI DPQTHRPLTE TANTNSTAKA TVTAIAPTEL DLRNVPRFSK 120 ANFITTPSLD FKYNEFQVKG RTESLEEGNC ASSGLTTEEE QQQQQEKYPS SGQELNLELS 180 IGISSGGKNS TQLSSANYAE FKPHPDNSNY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09460.1 | 3e-59 | MYB family protein |