PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022727198.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | bHLH | ||||||||
Protein Properties | Length: 219aa MW: 25254 Da PI: 6.8846 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.6 | 1.5e-10 | 29 | 78 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +++E++RR +++ +++L +llP+ + +++ ls + +Av+YIks q XP_022727198.1 29 ERKIIEKNRRIHMKILYSRLNSLLPHhN---SKEPLSLPDQIDEAVNYIKSVQ 78 5789**********************44...6666***************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MELQMECLVL NLGVNKGMER SRCSSAKVER KIIEKNRRIH MKILYSRLNS LLPHHNSKEP 60 LSLPDQIDEA VNYIKSVQTR LKESREKKES LMGRKRSYRC TDSTAAETTV NLKSPEIRIN 120 EKGSAMEVVL TTGQDSQFMF YEMIRILNEQ EAEVLNATFS VVGNTVFHIV HAEIGAFGAA 180 KILKEKLNKF VHGSSNEEEL PKELWDYEIH PEEWDFPIM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 2e-40 | bHLH family protein |