PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022726848.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 616aa    MW: 67493.6 Da    PI: 6.1795
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022726848.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS451.65.2e-1382476061374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv++L++cAeav++++++la+al++++  la +++ +m+++a++f+eALa+r++r        l p++  +++ s++l+++  f+e++P+lkf+h
  XP_022726848.1 247 LVHTLMACAEAVQQKNFSLAEALVKQIGILAISQAGAMRKVATCFAEALARRIYR--------LYPQNPLDHSLSDVLHMH--FYETCPYLKFAH 331
                     689****************************************************........445555556688888885..************ PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +taNqaIlea+eg++rvH+iDf+++qG+QWpaL+qaLa R +gpp++R+Tg+g+p++++++ l+e+g++La++Ae ++v+fe++ +va++l+dle
  XP_022726848.1 332 FTANQAILEAFEGKKRVHVIDFSMNQGMQWPALMQALALRVGGPPTFRLTGIGPPSHDNSDHLQEVGWKLAQLAEMIHVKFEYRGFVANSLADLE 426
                     *********************************************************************************************** PP

            GRAS 191 leeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                      ++L+v+p   E++aVn+v++lh+ll++++++++    vL+lvk+++P++v++veqea+hn++ Fl+rf+e+l+yys+lfdsle ++   s++++
  XP_022726848.1 427 ASMLDVRPteVEVVAVNSVFELHKLLARPGAIDK----VLSLVKRMKPEIVTIVEQEANHNGPIFLDRFTESLHYYSTLFDSLEGSV---SSQDK 514
                     ********88899*************99999988....************************************************7...99999 PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     ++++++lg++i+nvvaceg +r+erhetl +Wr rl +aGF pv+l+++a kqa++ll+ ++ +dg+ vee++g+l+lgW++rpL+++SaW+
  XP_022726848.1 515 VMSEAYLGKQICNVVACEGVDRVERHETLTQWRTRLVSAGFAPVHLGSNAFKQASMLLALFAgGDGHAVEENNGCLMLGWHNRPLITTSAWK 606
                     9999***************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 616 aa     Download sequence    
MKRDLHHLQS NPDPPTVGSS SVCGGSTTGK TKMWEEEAAQ QDCGMDELLA VLGYKVKTSD  60
MAEVAQKLEQ LEEVMCNVQD DGISHLASET VHYNPSDLST WLESMLCELN PPSTPVVAAG  120
TTAAAAAATL DDSFLAPAES STLTTLDFGN NNKKHQKRGQ QILEEASCSD YDLKAIPGKA  180
IYSQKAQSQT HDSSSPSTQN NVKSEKRLKS SSGSHLDIFP PDASYGISAE STRPVVLVDS  240
QENGIRLVHT LMACAEAVQQ KNFSLAEALV KQIGILAISQ AGAMRKVATC FAEALARRIY  300
RLYPQNPLDH SLSDVLHMHF YETCPYLKFA HFTANQAILE AFEGKKRVHV IDFSMNQGMQ  360
WPALMQALAL RVGGPPTFRL TGIGPPSHDN SDHLQEVGWK LAQLAEMIHV KFEYRGFVAN  420
SLADLEASML DVRPTEVEVV AVNSVFELHK LLARPGAIDK VLSLVKRMKP EIVTIVEQEA  480
NHNGPIFLDR FTESLHYYST LFDSLEGSVS SQDKVMSEAY LGKQICNVVA CEGVDRVERH  540
ETLTQWRTRL VSAGFAPVHL GSNAFKQASM LLALFAGGDG HAVEENNGCL MLGWHNRPLI  600
TTSAWKLANK ITAFAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.10.0GRAS family protein