PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022726806.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 486aa MW: 54246.9 Da PI: 7.7519

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022726806.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.6	1.1e-16	61	105	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE++++++a +++G g W+ I +++g ++t+ q++s+ qk+ XP_022726806.1 61 REKWTEEEHQKFLEALRLYGRG-WRQIEEHVG-TKTAVQIRSHAQKF 105 789*****************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence
MATEAEDQME GKTSVNALKS GICRSNGSPQ SETLIQLHEL YTFKHDHTLK VRKPYTITKQ 60 REKWTEEEHQ KFLEALRLYG RGWRQIEEHV GTKTAVQIRS HAQKFFSKVV RESNGGFQCS 120 IKPIEIPPPR PKRKPIRPYP RKSVDSHKGI SASSQPETSS SPNHFVTEQD NKSLASVLSA 180 FASDAMGSTD SEQQNGCSSP TSSSTNMESI NTSPVEKEID HVTSNLSAEE EKASLSSANM 240 LGHSAVENIF FMKSNVDFKD PMCAKGDATT VVPFTSIKLF GKIVQVKDSV KPFMCAENLK 300 SQTSKTGQED IGAVSEILVQ ALPSTYLDTR LSLGAVIDDW SMVPSRANLS PHMEIHPDKN 360 DHVESTSGAT LPRWAFHPGL PFYYITSFNQ THMDFCFKER MKEKEILNER SCTGSNTGTV 420 PRAENREKNS DSVDSQSQHP CPEGRMIPQK CSKGFVPYKR CLAERDMTSS VVASEERERQ 480 RARVCS

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence

MATEAEDQME GKTSVNALKS GICRSNGSPQ SETLIQLHEL YTFKHDHTLK VRKPYTITKQ  60
REKWTEEEHQ KFLEALRLYG RGWRQIEEHV GTKTAVQIRS HAQKFFSKVV RESNGGFQCS  120
IKPIEIPPPR PKRKPIRPYP RKSVDSHKGI SASSQPETSS SPNHFVTEQD NKSLASVLSA  180
FASDAMGSTD SEQQNGCSSP TSSSTNMESI NTSPVEKEID HVTSNLSAEE EKASLSSANM  240
LGHSAVENIF FMKSNVDFKD PMCAKGDATT VVPFTSIKLF GKIVQVKDSV KPFMCAENLK  300
SQTSKTGQED IGAVSEILVQ ALPSTYLDTR LSLGAVIDDW SMVPSRANLS PHMEIHPDKN  360
DHVESTSGAT LPRWAFHPGL PFYYITSFNQ THMDFCFKER MKEKEILNER SCTGSNTGTV  420
PRAENREKNS DSVDSQSQHP CPEGRMIPQK CSKGFVPYKR CLAERDMTSS VVASEERERQ  480
RARVCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18330.1	4e-37	MYB_related family protein