PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022726545.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 215aa MW: 24490.9 Da PI: 9.574 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 85.6 | 3e-27 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +i+n+ rqvtfskRr g++KKA+ELS+LCdae+a+++fs+tgkl+eyss XP_022726545.1 10 KIDNTAARQVTFSKRRRGLFKKAQELSTLCDAEIALLVFSTTGKLFEYSS 59 79**********************************************96 PP | |||||||
2 | K-box | 56.4 | 1.3e-19 | 90 | 172 | 17 | 99 |
K-box 17 lqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + +a L kei + +e+R+l GedL+ L+l+eL++Le+ Le +l+++ ++K+e ++++i++l++k el e+n++L++++e XP_022726545.1 90 ESSTYAVLSKEIAEKTQELRQLRGEDLQGLDLEELKHLEKLLEGGLSRVTKTKDERFFREISTLKRKGAELMEANQQLKQQME 172 566788899999999999**************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MTRKKIPIQK IDNTAARQVT FSKRRRGLFK KAQELSTLCD AEIALLVFST TGKLFEYSST 60 SIGQVIERRN LQSEKVGRLD HIPYPELQLE SSTYAVLSKE IAEKTQELRQ LRGEDLQGLD 120 LEELKHLEKL LEGGLSRVTK TKDERFFREI STLKRKGAEL MEANQQLKQQ MEYFPHEVQA 180 VVAQQGQPSE LTTNIRSSTD SSKGYNSSDI SLRLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 2e-57 | MIKC_MADS family protein |