PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022726244.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 326aa MW: 37515.2 Da PI: 8.5696

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022726244.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.7	6.1e-14	26	70	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd++l + + + G+++W+ Ia+++ +t qc+ rw++yl XP_022726244.1 26 TWTQEEDDILREQISLNGTENWAIIASKFK-DKTTRQCRRRWYTYL 70 6**************************9.***********97 PP
2	Myb_DNA-binding	44.4	3.9e-14	76	119	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + XP_022726244.1 76 KGGWSPEEDMLLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFST 119 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence
MQEIKKKNCG AGSNEDSKKK ERHIVTWTQE EDDILREQIS LNGTENWAII ASKFKDKTTR 60 QCRRRWYTYL NSDFKKGGWS PEEDMLLCEA QKIFGNRWTE IAKVVSGRTD NAVKNRFSTL 120 CKKRAKYEAL AKENTTCINP NNKRILLRNG FNTDGTTECT APVKRMRRSH ISDLSGNCNF 180 GDRAHRVSAT IINQQQRHPF AVLGQNLHNV INVLVQSQVN NVKEVSDDAA QNNRIQGTFF 240 KQDDPMITAL MQQAELLSSL ALKVNTDNTD QSLENAWMIL QDFLNQSKKN DIFRCTISDI 300 DFELEDFKDL LEDLRSSNEG TRPSWR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.1	1e-140	MYB family protein