PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022725573.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | bHLH | ||||||||
Protein Properties | Length: 235aa MW: 25930.6 Da PI: 5.2217 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 20.8 | 6.8e-07 | 144 | 170 | 4 | 30 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 4 ahnerErrRRdriNsafeeLrellPka 30 +h+ +Er RR++i +++ L++l+P + XP_022725573.1 144 SHSLAERARREKISERMKILQDLVPGC 170 8************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MDPPAMMSDG GYNLPEIWQN PVSESGIRRG QVGPGLGQFG DPNREVSGNY PVSLEQQQRG 60 GGIRRMRDEE DEAAKVVSTS SGNTMNDDDE KRLKASGSRD ENHDSKAEAE PSSGKPVEQK 120 AQPPEPPKQD YIHVRARRGQ ATDSHSLAER ARREKISERM KILQDLVPGC NKFLSMKLEA 180 VNSRMIPAIE VFPPKDYGQQ AYDATGMAFG SQETSEYSHG TSPEWLHIGG GFERT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59640.1 | 8e-70 | bHLH family protein |