PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022725159.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | bHLH | ||||||||
Protein Properties | Length: 329aa MW: 36523.7 Da PI: 7.3036 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.1 | 1.8e-09 | 46 | 93 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + rE+ RRdr+N+ f eL l ++ +K++Ka+iL+ +++ +k+L XP_022725159.1 46 LQKADREKLRRDRLNEHFLELGNTLDPD----RPKNDKATILTDTIQLLKDL 93 56778********************997....79***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence |
MDQLKNDAAF VQSVPSSKPS IIEFRQPKSN QRVEGEPRDC IAARKLQKAD REKLRRDRLN 60 EHFLELGNTL DPDRPKNDKA TILTDTIQLL KDLTSQVTKL KAEYDTLTEE SRELTQEKND 120 LKEEKASLKS DIDNLNIQYQ QRVRTMFPWA TVDHSVVMAP PYPFPVPIAM PPPGAIPMHP 180 SMPPFPFFGN QNHGVIHNPC STFVPYMTPN TMVEQQSTQH VAPPAQPGSR SHSSGKQDSK 240 NKSSGESKVE KTVDSNDVAT DLELKTPGST ADQDLSSGQK KLKKSLRKEN SNTEGSHSSR 300 CSSSYSAHDS SSNSIVGGKK ADDLDGRND |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19860.1 | 2e-86 | bHLH family protein |