PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022725156.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | bHLH | ||||||||
Protein Properties | Length: 330aa MW: 36651.8 Da PI: 7.3036 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.1 | 1.8e-09 | 46 | 93 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + rE+ RRdr+N+ f eL l ++ +K++Ka+iL+ +++ +k+L XP_022725156.1 46 LQKADREKLRRDRLNEHFLELGNTLDPD----RPKNDKATILTDTIQLLKDL 93 56778********************997....79***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 330 aa Download sequence |
MDQLKNDAAF VQSVPSSKPS IIEFRQPKSN QRVEGEPRDC IAARKLQKAD REKLRRDRLN 60 EHFLELGNTL DPDRPKNDKA TILTDTIQLL KDLTSQVTKL KAEYDTLTEE SREQLTQEKN 120 DLKEEKASLK SDIDNLNIQY QQRVRTMFPW ATVDHSVVMA PPYPFPVPIA MPPPGAIPMH 180 PSMPPFPFFG NQNHGVIHNP CSTFVPYMTP NTMVEQQSTQ HVAPPAQPGS RSHSSGKQDS 240 KNKSSGESKV EKTVDSNDVA TDLELKTPGS TADQDLSSGQ KKLKKSLRKE NSNTEGSHSS 300 RCSSSYSAHD SSSNSIVGGK KADDLDGRND |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19860.1 | 2e-84 | bHLH family protein |