PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022724895.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | bHLH | ||||||||
Protein Properties | Length: 233aa MW: 26608.8 Da PI: 8.578 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41.5 | 2.4e-13 | 64 | 114 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 + h e Er+RR+++ s ++ Lr+llP ++K s ++ +Av+YI++L+ XP_022724895.1 64 KLHRELERQRRQDMASLYASLRSLLPDeY---IKGKRSMSDHMNEAVNYIQHLE 114 67*************************77...********************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MFPLQQSDDP VYQTFSSSNQ HKIPQDLITG HASLEGMGKS RRGKVCQMEG STEGFPCDKY 60 KKQKLHRELE RQRRQDMASL YASLRSLLPD EYIKGKRSMS DHMNEAVNYI QHLEKKVKDL 120 DVKKHETKRV SNLASLVSGT ESSNHCFIIR PCLIGIEIMF RCGFKEQDLP LSRVLAVLVD 180 EGLPVVSCVS TKSEEYLLHT IQTEVIFFLA ISFYFKVVTK AIGFLISFHF IGQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51790.1 | 7e-29 | bHLH family protein |