PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022724808.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C3H
Protein Properties Length: 380aa    MW: 41760.3 Da    PI: 7.2362
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022724808.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH28.72.2e-09108129426
                     ---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                     ++C+++ + G C+yGd+C+F H+
  XP_022724808.1 108 KICNYWVQ-GNCNYGDKCRFLHS 129
                     79******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    
MDLDGGNRRV FNRLGSPSAA PTDSSKHQKV CYHWRAGKCT RFPCPFLHSE LPHSSGPITA  60
NGSGAPKRFA DDSGFSGPAP RRGPNFNNNH NNSWGRMGPN KVVRKTEKIC NYWVQGNCNY  120
GDKCRFLHSW SLGESFTMLN HLDGHQKVVS GIALPAGMDK LYTGSKDETV RAWDTNSGQC  180
MGVIPLSGEV GCMISEGPWL FVGIPNIVKA WNTQTNLELS LSGPVGQVYA MVVGNDLLFA  240
GTQVWSLETL QCLQTLTEHT NVVMSLLCWE QFLLSCSLDQ TIKVWVATEN GNLQVTYTHN  300
EDPGLLNLRG MHDSESKPVL LCACNDNSVR LYDLPSFSER GKIFAKEEIR AIEVGPGGLF  360
FTGDGTGFRV WKLAEPIATS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25440.11e-163C3H family protein