PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022724504.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB_related
Protein Properties Length: 352aa    MW: 38224.8 Da    PI: 7.5271
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022724504.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.66.1e-13108152347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++lG+g+W+ Iar +   Rt+ q+ s+ qky
   XP_022724504.1 108 PWTEEEHRLFLIGLQKLGKGDWRGIARNFVMSRTPTQVASHAQKY 152
                      8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MTRRCSHCSN NGHNSRTCPK RGGGGNGGVK LFGVRLTDGS IIKKSASMGN LSSAHYHSSS  60
SAAASPNQGS PLSDHVRDPS HVLEGYLSDD PAAHGLTNHR GERKKGVPWT EEEHRLFLIG  120
LQKLGKGDWR GIARNFVMSR TPTQVASHAQ KYFIRHSNVT RRKRRSSLFD MVPDDMDTDA  180
PPVPEDQVLL PSSHVEEADN SNTIPSLNLS LNSEFEHGED AARETFKETE ETMMGSSGFK  240
PMVHGFFPPY VPVPFPFWPP NPAPPGEEKG IEASQHQVLK PVPLLPKEPV NVDELVGMSQ  300
LSIGETESGL REPSPLSLKL LGEPSRQSAF HANAPVGGRD LSKGKTGAIQ AV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.11e-99MYB_related family protein