PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022724368.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 608aa MW: 68177.1 Da PI: 7.6688

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022724368.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.9	7.7e-05	3	24	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC +C++ F ++ n++rHir+H XP_022724368.1 3 KCDKCSREFCSPINYRRHIRVH 24 7********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 608 aa Download sequence
MQKCDKCSRE FCSPINYRRH IRVHHRLKKL DKDSAKNRDL LAAFWDKLSE DEAKEVISFK 60 DVSLEEVPGS SVIKSLTALL KRPGFSALPL VCLRAGSALL DLVQARPSRF PVSSQELFSI 120 LDDASERTFL FGVAVSIQKY IFDGEAGKIG LETKNLVACT SFLVEQKLVK AWLADKDAEA 180 LRCQKLLVEE EEAAQKRQVE LLERKKQKKL RQKEQKAKEQ RQWEVEEDKQ NNDDSLEVNI 240 PAETSSTLAA FDSDGQNPVI STYQVLPSVE PIHISKPEED VDYEIQMGFS NGYCDSGTSQ 300 NVESRMEQVG GHQRIVVTRW QTPPKSHKGV LNDFHASQNS HRLKFGGMNK HGTKRERVAA 360 MGNSNKMWSR KSKAVYDGKS LRIREEKQTT NQLDQNKNHE VLIGSISVML GNCSYLEVNN 420 LAEACHRCLA ECQIPKKNNV QEKFSQLDPV QGVTNRSTIK FWRPVSQREG QSSLPVQNGV 480 KEFEVEVIAE KDGVQTFDES CLRLYATDRN DGVVSTNLSS TLEESVQPGS LQFDSHVAKA 540 FLARRWKEAI AGGHVTLVLS PNLEPPGCSE VENDSSEKWM DKAGAFEAST GGAAKGKFRT 600 MPEKVAKM

Sequence ? help Back to Top

Protein Sequence Length: 608 aa Download sequence

MQKCDKCSRE FCSPINYRRH IRVHHRLKKL DKDSAKNRDL LAAFWDKLSE DEAKEVISFK  60
DVSLEEVPGS SVIKSLTALL KRPGFSALPL VCLRAGSALL DLVQARPSRF PVSSQELFSI  120
LDDASERTFL FGVAVSIQKY IFDGEAGKIG LETKNLVACT SFLVEQKLVK AWLADKDAEA  180
LRCQKLLVEE EEAAQKRQVE LLERKKQKKL RQKEQKAKEQ RQWEVEEDKQ NNDDSLEVNI  240
PAETSSTLAA FDSDGQNPVI STYQVLPSVE PIHISKPEED VDYEIQMGFS NGYCDSGTSQ  300
NVESRMEQVG GHQRIVVTRW QTPPKSHKGV LNDFHASQNS HRLKFGGMNK HGTKRERVAA  360
MGNSNKMWSR KSKAVYDGKS LRIREEKQTT NQLDQNKNHE VLIGSISVML GNCSYLEVNN  420
LAEACHRCLA ECQIPKKNNV QEKFSQLDPV QGVTNRSTIK FWRPVSQREG QSSLPVQNGV  480
KEFEVEVIAE KDGVQTFDES CLRLYATDRN DGVVSTNLSS TLEESVQPGS LQFDSHVAKA  540
FLARRWKEAI AGGHVTLVLS PNLEPPGCSE VENDSSEKWM DKAGAFEAST GGAAKGKFRT  600
MPEKVAKM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	203	210	ERKKQKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-122	C2H2 family protein