PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022724011.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | Dof | ||||||||
Protein Properties | Length: 252aa MW: 27324.2 Da PI: 9.207 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 127.9 | 3.1e-40 | 17 | 77 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++lkcprC+stntkfCyynny+lsqPr+fCk+CrryWtkGGalrn+PvGgg+rkn k+s XP_022724011.1 17 EQEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKNTKRS 77 57899****************************************************9987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 252 aa Download sequence |
MQDPTGFQQM KAPVFPEQEQ LKCPRCESTN TKFCYYNNYN LSQPRHFCKN CRRYWTKGGA 60 LRNIPVGGGT RKNTKRSSSS NNNPKRQPNP AIDPTRNQKL PDPSPPPTTS STIPQQVILN 120 SGVQISGSDA DSTQMYVSSV HHQDRKMMDI GGSFSSLLAS NGQFGNLLEG LNPNGSGLKT 180 VQMGDFGGSL DSGRRMNPGP GRGRDPELGE SNNNVNTYLG LQGGGDTNCW TGGSNGWPDL 240 AIYTPGSSYQ QG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G51700.1 | 6e-39 | Dof family protein |