PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022723742.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

LBD

Protein Properties

Length: 270aa MW: 29999.6 Da PI: 8.0249

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022723742.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	109.5	2.5e-34	15	111	1	97
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCaaCk++r+kC+kdCv+a +fpa++++ f+ vhk+FG++n +++l++l++++r++a++sl +eA a+ +dP++G +g+++kl+++le lk++ + XP_022723742.1 15 ACAACKHQRKKCEKDCVFASHFPATRANYFREVHKIFGVKNATSILENLSPHDRKRAVESLEWEAFAWKEDPIQGPLGLFRKLERELELLKNQQN 109 7*****************************************************************************************99877 PP DUF260 96 ll 97 + XP_022723742.1 110 PQ 111 55 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MSAGNAEEPL NSRHACAACK HQRKKCEKDC VFASHFPATR ANYFREVHKI FGVKNATSIL 60 ENLSPHDRKR AVESLEWEAF AWKEDPIQGP LGLFRKLERE LELLKNQQNP QQNIVVPYQR 120 SGLIGFNNNS AGIVADTNIN ATNFGYANNP NLGLDVIMNN YAGLLQRADN IENPGLDNYF 180 PGIPNYHAIP QGQGRSVILQ EEGLDAVAHE TTALLPKQDL QRNQILGNSA MRPPASFNQG 240 HHQRGSKLGR LHAYIDGSVS GSQGRVEELR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06280.1	6e-21	LBD family protein