PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022723233.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 237aa MW: 26943.2 Da PI: 8.7255 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.9 | 2.8e-11 | 42 | 87 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + +ErrRR+++ +++ +Lr+++P + ++Ka+i e A+ YI++Lq XP_022723233.1 42 NLHAERRRRQKLSDRLLTLRSVVPII-----TNMNKATIIEDAITYIQELQ 87 5579*********************6.....58*****************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 237 aa Download sequence |
MDMEFVGSDM TILSITDPGP SRGRAGRRKL EDGDNKELKS KNLHAERRRR QKLSDRLLTL 60 RSVVPIITNM NKATIIEDAI TYIQELQKTS QVLSDQLLEM EKSSGEGRNS KRTEVDAAED 120 MKKCGIKEEV QVINIDGNKL LLKIILEKKR GCFTKLMEAM NYLGFELSET NVTTFKGAML 180 FSSCVQGAYG DNLMVKQTQE FLSEIIRRMR NCSECAIDDS KNMTQRILLL IVVERKP |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 27 | 52 | RRKLEDGDNKELKSKNLHAERRRRQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G21330.1 | 3e-39 | bHLH family protein |