PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022722165.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | NAC | ||||||||
Protein Properties | Length: 256aa MW: 30121.6 Da PI: 4.6714 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 97.5 | 2e-30 | 2 | 129 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +p GfrF+Ptdeel+ e L++kv+g++ + ++i e++iy++eP+dLp ++v+ +++e y+++kr++ +r+ r+ +g Wkat + k++ XP_022722165.1 2 VPIGFRFSPTDEELI-EILNQKVSGNTtMAPLDFIVETNIYEFEPQDLPwiQSVAFNKNEKYYYCKRESD----SREVRS--RGWWKATSHVKTI 89 589************.88*******996444689***************6446666889*******9875....467774..8************ PP NAM 93 lskkgelvglkktLvfy.....kgrapkgektdWvmheyrl 128 + +g++vg k+ L+f+ + +++++ kt+W+mhey l XP_022722165.1 90 SD-NGRVVGYKRPLTFHkfrddQTKRKDAIKTEWIMHEYVL 129 99.999***********7766556778888*********87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MVPIGFRFSP TDEELIEILN QKVSGNTTMA PLDFIVETNI YEFEPQDLPW IQSVAFNKNE 60 KYYYCKRESD SREVRSRGWW KATSHVKTIS DNGRVVGYKR PLTFHKFRDD QTKRKDAIKT 120 EWIMHEYVLQ SIPTEWRLCK IMYKGKERLE EDKENVRNDN PMSSKAGVSS SSINPMQLDY 180 FAFEEQQPLL PPLAVNNDYE NYFWSFSSFD DQLQLQELAQ PSSSFDPSSS MPILTPSYYD 240 HFAQDDNQQP FPDLWS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27300.1 | 6e-24 | NAC family protein |