PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022722127.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 349aa    MW: 40490 Da    PI: 5.5784
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022722127.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS1164.8e-3668321100374
            GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfe.fnvlvakrledlelee 193
                      aI + v g++rvH iDf i +      L++ L++  ++  s+R+ ++ +p+ ++  +++e ++ +++  ++ + ++e f+v++a++le++  ++
  XP_022722127.1  68 DAINNTVMGKKRVHLIDFRIPHLYYTEDLFDLLTDAFDDLISVRVSVILPPSLKKFVNVQEEKDYITEAVAQYKFKLEkFEVVYANSLEEVGESM 162
                     699*************************************************************************966**************** PP

            GRAS 194 Lrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpreseerikv 285
                     L++++  +Ea++V   ++l  ll+e + le      L  +++++P+ v++ e  a+hn+++F +rf +++++ys +f    ++k           
  XP_022722127.1 163 LDFRRteDEAVVVFYFFKLSMLLREAGILER----ELLKLRNINPDFVIIKEYAANHNHSDFIRRFEDSFQHYSHVFGLGlDNK----------- 242
                     ***9999****************99999999....55568*************************************8753555........... PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     E+ +l+r+i n+v ceg++r+ rh tl +Wr+ le+ GF p pl+   ++q+++l   +        e++g+lv   ++ pL+++SaW+
  XP_022722127.1 243 EENCLRRHINNIVGCEGRDRIVRHHTLDQWRSHLETNGFFPFPLK---MDQISRLSDCYR-------EDNGCLVRIEENCPLYFTSAWK 321
                     8999****************************************7...667777655554.......789****999***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MASSAFPVLL DCARAIEVGD LKLADSLLGS SSSRAYGLHP DFAYFKLQTT PPLYLRYWDG  60
IDEGSIDDAI NNTVMGKKRV HLIDFRIPHL YYTEDLFDLL TDAFDDLISV RVSVILPPSL  120
KKFVNVQEEK DYITEAVAQY KFKLEKFEVV YANSLEEVGE SMLDFRRTED EAVVVFYFFK  180
LSMLLREAGI LERELLKLRN INPDFVIIKE YAANHNHSDF IRRFEDSFQH YSHVFGLGLD  240
NKEENCLRRH INNIVGCEGR DRIVRHHTLD QWRSHLETNG FFPFPLKMDQ ISRLSDCYRE  300
DNGCLVRIEE NCPLYFTSAW KLKDGEHHFN PIGNNFVQGF QIKSIGCFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.15e-32GRAS family protein