PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022720905.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | Dof | ||||||||
Protein Properties | Length: 249aa MW: 27089.8 Da PI: 8.5871 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 128.7 | 1.7e-40 | 17 | 77 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++lkcprCdst+tkfCyynny+lsqPr+fCk+CrryWtkGGalrn+PvGgg+rkn k+s XP_022720905.1 17 EQEQLKCPRCDSTDTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKNTKRS 77 57899****************************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MQDPTGFQQM KRPAFPEQEQ LKCPRCDSTD TKFCYYNNYN LSQPRHFCKN CRRYWTKGGA 60 LRNIPVGGGT RKNTKRSSSS FSSTNNSKRQ PNPSPEPTPK QKLPDPSPPS AATPSTIPLQ 120 VILNSGIQNS CSELRGSEAE QTRMPVSSVD HQDRKMLDTG GSFSSLLGSN GQFWNLLEGL 180 NQNGSGLRTV QTGDFGGNLD SDREMDKGSV RDPGLGESNN NGERDLGGGG GSNGWPDLAM 240 YTPGSSSFQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51700.1 | 1e-36 | Dof family protein |