PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022720815.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 232aa MW: 26670.7 Da PI: 8.0957 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 36.4 | 6.8e-12 | 71 | 109 | 9 | 47 |
HHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS SRF-TF 9 rqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47 r ++fsk r i KKA+EL LC+ae+ i+fs+ gk + XP_022720815.1 71 RLISFSKCRSRIYKKASELAALCGAEIGFIVFSPAGKPF 109 789********************************9855 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MANIEWMLSI AETDTSYYHS LIKHMPMETF VLHTLREAMT ERRQLKGLIA FNFLTMSGSG 60 KKTKGRLEVD RLISFSKCRS RIYKKASELA ALCGAEIGFI VFSPAGKPFS FGHPSIESVA 120 NRFLHENPAP NDNTNPLVEA LRKGRINQLS QQLNEVLSQL DAAKETAKAI DQLTIEKETH 180 GWWETPIDQL NQKELQELYT YFEDLRNNLY SNMNKRVLEP LLHCLLQWIR LS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24840.1 | 7e-35 | M-type_MADS family protein |