PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022720802.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 357aa MW: 39930 Da PI: 10.2952

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022720802.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	46.5	9.6e-15	51	138	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspk...qCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +Li+a e+ +l+rg+lk+++W+ev++ + +++ ++++pk qCk++++ ++k+yk +k+ ++ + s++++f++l+ XP_022720802.1 51 CWSEGATGVLIDAWGERYLELSRGNLKQKHWKEVADIVsAREDYTKTPKtdiQCKNRIDTVKKKYKVEKAKIASG--GGPSKWVFFEKLD 138 7***********************************866677776654449****************97..67778****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
NRQPEEQQQH ENTLALALPP QQHENTLTLT LPLQQQPKNN GRGGGGERED CWSEGATGVL 60 IDAWGERYLE LSRGNLKQKH WKEVADIVSA REDYTKTPKT DIQCKNRIDT VKKKYKVEKA 120 KIASGGGPSK WVFFEKLDQL IGPTAKITGN AAAVVGGSGV STGFLSKIPM GIPVGIRSSL 180 NPFRVSQLQK RQQQQKQPRV VVLKNQNTMH LTKRGPLGTN SEEEEEKQKQ EEADSLNSSP 240 PRPTGKRARR VVHKGVDSGE KGRKWGNSLR ELTQAILRFG EAYEQAESAK LQQVVEMEKQ 300 RMEFAKELEL QRMQFFMKTQ LEISQLKHGR KGAGIGNGSN HYSNINNSNN NNISDST

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

NRQPEEQQQH ENTLALALPP QQHENTLTLT LPLQQQPKNN GRGGGGERED CWSEGATGVL  60
IDAWGERYLE LSRGNLKQKH WKEVADIVSA REDYTKTPKT DIQCKNRIDT VKKKYKVEKA  120
KIASGGGPSK WVFFEKLDQL IGPTAKITGN AAAVVGGSGV STGFLSKIPM GIPVGIRSSL  180
NPFRVSQLQK RQQQQKQPRV VVLKNQNTMH LTKRGPLGTN SEEEEEKQKQ EEADSLNSSP  240
PRPTGKRARR VVHKGVDSGE KGRKWGNSLR ELTQAILRFG EAYEQAESAK LQQVVEMEKQ  300
RMEFAKELEL QRMQFFMKTQ LEISQLKHGR KGAGIGNGSN HYSNINNSNN NNISDST

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	242	251	RPTGKRARRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G14180.1	7e-55	Trihelix family protein