PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022718279.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 188aa    MW: 21647.5 Da    PI: 9.94
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022718279.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF48.41.2e-153878242
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                     i+n+s r+vt+ kR++g+lKK +EL +LC++ ++ iifss
  XP_022718279.1 38 LISNESVRKVTLKKRKAGLLKKLNELTTLCGVAACAIIFSS 78
                    59**************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MVMTMHASVS IIFQKNVCAI YSFSAFLTMG RKKIKHELIS NESVRKVTLK KRKAGLLKKL  60
NELTTLCGVA ACAIIFSSCD TQPDVWPSKI EAFHVIEKFN NLPAKKRDKN MMDRHVFLSR  120
SILQLNERLE KQRKKNQELE MELVLAEHMA GENNCDLNNL EQLKELVHLL QDDIKFVTNK  180
IESKGFKV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13153RKKIKHELISNESVRKVTLKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.19e-30M-type_MADS family protein