PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022717437.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 797aa    MW: 88629.8 Da    PI: 5.8587
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022717437.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.14.1e-2084139156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t+ q++e+e++F++n++p+ ++r +L+++lgL+ rqVk+WFqNrR++ k
  XP_022717437.1  84 KKRYHRHTARQIQEMEAVFKENPHPDDKQRMKLSQELGLKPRQVKFWFQNRRTQIK 139
                     688899**********************************************9877 PP
2START152.24.4e-482825092206
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS..............SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskv.............dsgealrasgvvdmvlallveellddkeqWdetla....ka 79 
                     la + ++elvk+ +a+ep+Wv+    eng+e l  +e ++              +++ea+r+s+vv+m++++lv  +ld + +W e ++    +a
  XP_022717437.1 282 LAMSSMDELVKMCQANEPLWVRNN--ENGKELLNLEEHARMfhwplslkqrsseFRTEASRDSAVVIMNSVTLVDAFLDAN-KWAELFPsvvaRA 373
                     67789*****************99..9999999999888889***************************************.******99999** PP

                     EEEEEECTT.....EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE....TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEE CS
           START  80 etlevissg.....galqlmvaelqalsplvp.RdfvfvRyirq...lgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvt 165
                     +t++vis+g     g lqlm+aelq+lsplvp R+ +f+Ry++q   + +  w+ivd  +d   ++  +ss+   +++ Sg+li++++ng+s+vt
  XP_022717437.1 374 KTVQVISPGvsgtnGSLQLMYAELQVLSPLVPtREAYFLRYCQQqnlKDETYWAIVDFPLDGFHNNL-QSSFPLYRRRASGCLIQDMPNGYSRVT 467
                     ********************************************996666779********999998.77777777******************* PP

                     EEE-EE--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 166 wvehvdlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                     wveh++  +  p h+++ ++v +g+a+ga++w+a  +rqce+
  XP_022717437.1 468 WVEHAEIIEEKPvHQIFSHFVYNGIAFGAQRWLAVSERQCER 509
                     ******9999999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 797 aa     Download sequence    
MYGDCQIMSS VGGNVVSSET LFSSPIQNPN FNFLPLQPLP PMVPKEENGL FLRGKEGMDS  60
GSGSEQAEEK SGNEQESTEQ PPKKKRYHRH TARQIQEMEA VFKENPHPDD KQRMKLSQEL  120
GLKPRQVKFW FQNRRTQIKA QQDRSDNVIL RAENESLKNE FYRLQAELSK LVCPNCGGPA  180
VPGGVSFEEL RMENARLREE VERVCAIASR YIGRPIQIMG AAPAMMPPSL DLDMNIYPRH  240
FTEPMASCAE MMPVPMLPET ATYPENNNLV LMDEEKTVAM ELAMSSMDEL VKMCQANEPL  300
WVRNNENGKE LLNLEEHARM FHWPLSLKQR SSEFRTEASR DSAVVIMNSV TLVDAFLDAN  360
KWAELFPSVV ARAKTVQVIS PGVSGTNGSL QLMYAELQVL SPLVPTREAY FLRYCQQQNL  420
KDETYWAIVD FPLDGFHNNL QSSFPLYRRR ASGCLIQDMP NGYSRVTWVE HAEIIEEKPV  480
HQIFSHFVYN GIAFGAQRWL AVSERQCERI ASLMARNITD LGVIPSLEAR KNLMRLAQRM  540
IRTFCVNIST SSGQLWTALP DSADDTVRIT TRKITEPGQP NGLILCAVST TWLPYPHYQV  600
FDLLRDERRR AQLEVLSNGN ALHEVAHIAN GAHPGNCISL LRINVASNSS QHVELMLQES  660
CTDRSGSLVV YSTVDVDSVQ LAMSGEDPSC IPLLPIGFYL TPVELIRDAS GEGKSVPPSE  720
EANGHISGSL LTVGLQVLAS SVPSTKINLS SIAAINNHLC TTVHQISAAL SSSSTPSCPR  780
NGNGLGSCAE PASAPEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46880.10.0HD-ZIP family protein