PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022715890.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | NAC | ||||||||
Protein Properties | Length: 173aa MW: 20377.8 Da PI: 5.5918 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 82.4 | 9e-26 | 13 | 144 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrkn..ratk..sgyWkatgkd 89 lp+G+rF Ptdeelv++yL ++v k+ ++++ i+ ++y+ P++ +++++e+ew+fF+++d + +++k+ r++ g+W++ g+ XP_022715890.1 13 LPVGYRFVPTDEELVSHYLINRVFCKPvpASVFQEINASELYSQPPKSSV-QFSSGEREWFFFIHKDGNFDDEQHKTlfRMVGdgLGFWRSNGE- 105 799************************44444556888889999998874.788999*********9988765555422554434789****98. PP NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 k++++++g++v k L++++g +k++kt+W m+eyrl XP_022715890.1 106 KPLFDTSGNVVAFKIHLTYFSGCLSKAKKTHWRMDEYRL 144 888888*******************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence |
MEDQDDDFGD QYLPVGYRFV PTDEELVSHY LINRVFCKPV PASVFQEINA SELYSQPPKS 60 SVQFSSGERE WFFFIHKDGN FDDEQHKTLF RMVGDGLGFW RSNGEKPLFD TSGNVVAFKI 120 HLTYFSGCLS KAKKTHWRMD EYRLPIQFYT LHNSKEEWAL GRLTRGRDYN FDF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53950.1 | 2e-21 | NAC family protein |