PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022715269.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 200aa MW: 23175.2 Da PI: 9.2029 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.2 | 4.3e-19 | 23 | 70 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+++++ +G ++Wkt+a + g++R++k+c++rw +yl XP_022715269.1 23 KGAWTAEEDRKLAEVIAVHGAKRWKTVAIKAGLNRCGKSCRLRWMNYL 70 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.8 | 3.9e-16 | 76 | 121 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l XP_022715269.1 76 RGNISDQEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 121 78999*****************.*********.************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 200 aa Download sequence |
MAPLKEETIK MEENVSRKRE VNKGAWTAEE DRKLAEVIAV HGAKRWKTVA IKAGLNRCGK 60 SCRLRWMNYL RPNIKRGNIS DQEEDLILRL HKLLGNRWSL IAGRLPGRTD NEIKNYWNSH 120 LSKKINQKEK QSGAAARQGC KAQKRQVENA KEEVREENTS TGGEDSNISF DVDEFLNFSN 180 EDPLNLDWMN RFFEVDEVFN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G40330.1 | 9e-58 | MYB family protein |