PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022715030.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB_related
Protein Properties Length: 338aa    MW: 36699.9 Da    PI: 7.4767
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022715030.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.65.7e-13106150347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++lG+g+W+ Iar +   Rt+ q+ s+ qky
   XP_022715030.1 106 PWTEEEHRLFLIGLQKLGKGDWRGIARNFVMSRTPTQVASHAQKY 150
                      8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MTRRCSHCSN NGHNSRTCPT RGGGGGVKLF GVRLTDGSII KKSASMGNLS SAHYHSSSSA  60
AASPNPDSPL SDHVHDPNNV PDGYLSDDPA AHASTNRPGE RKKGVPWTEE EHRLFLIGLQ  120
KLGKGDWRGI ARNFVMSRTP TQVASHAQKY FIRQSNVTRR KRRSSLFDLV PDDMATDTPT  180
VPEEQVLLPS SQVEEAGNAN SIPSLNHFLN SEFEHRQAAA QETVKETEET MIGSSGFTPM  240
APGFFPPYAP IPYPFWPPNP ASPDDEKGRA ASQHQVLKPI PLLPKEPVNV DELVGMSQLS  300
IGQTENGHRE PSPLSLKLLG EPSRQSAFHA NAPVGAQI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.11e-89MYB_related family protein